This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1qml

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:49, 13 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Hg complex of yeast 5-aminolaevulinic acid dehydratase==
==Hg complex of yeast 5-aminolaevulinic acid dehydratase==
-
<StructureSection load='1qml' size='340' side='right' caption='[[1qml]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='1qml' size='340' side='right'caption='[[1qml]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1qml]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QML OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QML FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1qml]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QML FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1aw5|1aw5]], [[1qmk|1qmk]], [[1qnv|1qnv]], [[1ylv|1ylv]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Porphobilinogen_synthase Porphobilinogen synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.24 4.2.1.24] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qml OCA], [https://pdbe.org/1qml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qml RCSB], [https://www.ebi.ac.uk/pdbsum/1qml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qml ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qml OCA], [http://pdbe.org/1qml PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1qml RCSB], [http://www.ebi.ac.uk/pdbsum/1qml PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1qml ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HEM2_YEAST HEM2_YEAST]] Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
+
[https://www.uniprot.org/uniprot/HEM2_YEAST HEM2_YEAST] Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 1qml" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1qml" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Porphobilinogen synthase|Porphobilinogen synthase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Porphobilinogen synthase]]
+
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Cooper, J B]]
+
[[Category: Cooper JB]]
-
[[Category: Erskine, P T]]
+
[[Category: Erskine PT]]
-
[[Category: Senior, N]]
+
[[Category: Senior N]]
-
[[Category: Warren, M J]]
+
[[Category: Warren MJ]]
-
[[Category: Wood, S P]]
+
[[Category: Wood SP]]
-
[[Category: Aldolase]]
+
-
[[Category: Dehydratase]]
+
-
[[Category: Tetrapyrrole synthesis]]
+
-
[[Category: Tim barrel]]
+

Current revision

Hg complex of yeast 5-aminolaevulinic acid dehydratase

PDB ID 1qml

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools