This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1uvi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:00, 13 December 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
==THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2 INHIBITION OF AN RNA-DEPENDENT RNA POLYMERASE PHI6P2 WITH 6NT RNA==
+
 
-
<StructureSection load='1uvi' size='340' side='right' caption='[[1uvi]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+
==The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 with 6nt RNA==
 +
<StructureSection load='1uvi' size='340' side='right'caption='[[1uvi]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1uvi]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UVI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UVI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1uvi]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_virus_phi6 Pseudomonas virus phi6] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UVI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1hhs|1hhs]], [[1hht|1hht]], [[1hi0|1hi0]], [[1hi1|1hi1]], [[1hi8|1hi8]], [[1uvj|1uvj]], [[1uvk|1uvk]], [[1uvl|1uvl]], [[1uvm|1uvm]], [[1uvn|1uvn]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uvi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uvi RCSB], [http://www.ebi.ac.uk/pdbsum/1uvi PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uvi OCA], [https://pdbe.org/1uvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uvi RCSB], [https://www.ebi.ac.uk/pdbsum/1uvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uvi ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RDRP_BPPH6 RDRP_BPPH6]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1uvi" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[RNA polymerase|RNA polymerase]]
+
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bamford, D]]
+
[[Category: Large Structures]]
-
[[Category: Butcher, S]]
+
[[Category: Pseudomonas virus phi6]]
-
[[Category: Grimes, J M]]
+
[[Category: Synthetic construct]]
-
[[Category: Makeyev, E V]]
+
[[Category: Bamford D]]
-
[[Category: Salgado, P S]]
+
[[Category: Butcher S]]
-
[[Category: Stuart, D I]]
+
[[Category: Grimes JM]]
-
[[Category: Polymerase]]
+
[[Category: Makeyev EV]]
-
[[Category: Polymerase-complex]]
+
[[Category: Salgado PS]]
-
[[Category: Rna-dependent rna polymerase complex with 6nt rna oligonucleotide]]
+
[[Category: Stuart DI]]
-
[[Category: Structural protein]]
+
-
[[Category: Transcription]]
+

Current revision

The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 with 6nt RNA

PDB ID 1uvi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools