This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2but

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2but' size='340' side='right'caption='[[2but]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='2but' size='340' side='right'caption='[[2but]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2but]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BUT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BUT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2but]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BUT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BUT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1eo2|1eo2]], [[1eo9|1eo9]], [[1eoa|1eoa]], [[1eob|1eob]], [[1eoc|1eoc]], [[2bum|2bum]], [[2buq|2buq]], [[2bur|2bur]], [[2buu|2buu]], [[2buv|2buv]], [[2buw|2buw]], [[2bux|2bux]], [[2buy|2buy]], [[2buz|2buz]], [[2bv0|2bv0]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Protocatechuate_3,4-dioxygenase Protocatechuate 3,4-dioxygenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.3 1.13.11.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2but FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2but OCA], [https://pdbe.org/2but PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2but RCSB], [https://www.ebi.ac.uk/pdbsum/2but PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2but ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2but FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2but OCA], [https://pdbe.org/2but PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2but RCSB], [https://www.ebi.ac.uk/pdbsum/2but PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2but ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/PCXA_ACIAD PCXA_ACIAD]] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway. [[https://www.uniprot.org/uniprot/PCXB_ACIAD PCXB_ACIAD]] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway.
+
[https://www.uniprot.org/uniprot/PCXA_ACIAD PCXA_ACIAD] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aciad]]
+
[[Category: Acinetobacter baylyi ADP1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Protocatechuate 3,4-dioxygenase]]
+
[[Category: D'Argenio DA]]
-
[[Category: Argenio, D A.D]]
+
[[Category: Lipscomb JD]]
-
[[Category: Lipscomb, J D]]
+
[[Category: Ohlendorf DH]]
-
[[Category: Ohlendorf, D H]]
+
[[Category: Ornston LN]]
-
[[Category: Ornston, L N]]
+
[[Category: Valley MP]]
-
[[Category: Valley, M P]]
+
[[Category: Vetting MW]]
-
[[Category: Vetting, M W]]
+
-
[[Category: Aromatic degradation]]
+
-
[[Category: Aromatic hydrocarbons catabolism]]
+
-
[[Category: Dioxygenase]]
+
-
[[Category: Iron]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Non-heme iron]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal Structure Of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R457S - APO

PDB ID 2but

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2but"
Personal tools