This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2buw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 13 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2buw.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R457S in Complex with 4-Hydroxybenzoate==
-
The line below this paragraph, containing "STRUCTURE_2buw", creates the "Structure Box" on the page.
+
<StructureSection load='2buw' size='340' side='right'caption='[[2buw]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2buw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BUW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BUW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
-
{{STRUCTURE_2buw| PDB=2buw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2buw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2buw OCA], [https://pdbe.org/2buw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2buw RCSB], [https://www.ebi.ac.uk/pdbsum/2buw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2buw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PCXA_ACIAD PCXA_ACIAD] Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bu/2buw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2buw ConSurf].
 +
<div style="clear:both"></div>
-
'''CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R457S IN COMPLEX WITH 4-HYDROXYBENZOATE'''
+
==See Also==
-
 
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2BUW is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BUW OCA].
+
[[Category: Acinetobacter baylyi ADP1]]
-
[[Category: Acinetobacter calcoaceticus]]
+
[[Category: Large Structures]]
-
[[Category: Protein complex]]
+
[[Category: D'Argenio DA]]
-
[[Category: Protocatechuate 3,4-dioxygenase]]
+
[[Category: Lipscomb JD]]
-
[[Category: Argenio, D A.D.]]
+
[[Category: Ohlendorf DH]]
-
[[Category: Lipscomb, J D.]]
+
[[Category: Ornston LN]]
-
[[Category: Ohlendorf, D H.]]
+
[[Category: Valley MP]]
-
[[Category: Ornston, L N.]]
+
[[Category: Vetting MW]]
-
[[Category: Valley, M P.]]
+
-
[[Category: Vetting, M W.]]
+
-
[[Category: Aromatic degradation]]
+
-
[[Category: Beta-sandwich]]
+
-
[[Category: Dioxygenase]]
+
-
[[Category: Mixed alpha/beta structure]]
+
-
[[Category: Non-heme iron]]
+
-
[[Category: Oxidoreductase]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 20:49:58 2008''
+

Current revision

Crystal Structure of Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 Mutant R457S in Complex with 4-Hydroxybenzoate

PDB ID 2buw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2buw"
Personal tools