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2cdm

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==THE STRUCTURE OF TRWC COMPLEXED WITH A 27-MER DNA COMPRISING THE RECOGNITION HAIRPIN AND THE CLEAVAGE SITE==
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<StructureSection load='2cdm' size='340' side='right' caption='[[2cdm]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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==The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site==
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<StructureSection load='2cdm' size='340' side='right'caption='[[2cdm]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2cdm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CDM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2cdm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CDM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1omh|1omh]], [[1osb|1osb]], [[1qx0|1qx0]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cdm OCA], [https://pdbe.org/2cdm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cdm RCSB], [https://www.ebi.ac.uk/pdbsum/2cdm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cdm ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cdm OCA], [http://pdbe.org/2cdm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cdm RCSB], [http://www.ebi.ac.uk/pdbsum/2cdm PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q47673_ECOLX Q47673_ECOLX]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cdm_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cdm_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cdm ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus coli migula 1895]]
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[[Category: Escherichia coli]]
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[[Category: Blanco, A G]]
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[[Category: Large Structures]]
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[[Category: Boer, R]]
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[[Category: Blanco AG]]
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[[Category: Coll, M]]
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[[Category: Boer R]]
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[[Category: Cruz, F De La]]
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[[Category: Coll M]]
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[[Category: Guasch, A]]
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[[Category: Guasch A]]
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[[Category: Lucas, M]]
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[[Category: Lucas M]]
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[[Category: Perez-Luque, R]]
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[[Category: Perez-Luque R]]
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[[Category: Russi, S]]
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[[Category: Russi S]]
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[[Category: Bacterial conjugation]]
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[[Category: De la Cruz F]]
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[[Category: Dna transfer]]
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[[Category: Dna-dna-binding protein complex]]
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[[Category: Dna-protein complex]]
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[[Category: Dna/dna-binding protein]]
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[[Category: Relaxase]]
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Current revision

The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site

PDB ID 2cdm

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