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2j9n
From Proteopedia
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==Robotically harvested Trypsin complexed with Benzamidine containing polypeptide mediated crystal contacts== | ==Robotically harvested Trypsin complexed with Benzamidine containing polypeptide mediated crystal contacts== | ||
| - | <StructureSection load='2j9n' size='340' side='right' caption='[[2j9n]], [[Resolution|resolution]] 1.50Å' scene=''> | + | <StructureSection load='2j9n' size='340' side='right'caption='[[2j9n]], [[Resolution|resolution]] 1.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2j9n]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2j9n]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J9N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J9N FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IPH:PHENOL'>IPH</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j9n OCA], [https://pdbe.org/2j9n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j9n RCSB], [https://www.ebi.ac.uk/pdbsum/2j9n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j9n ProSAT]</span></td></tr> | |
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| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/2j9n_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/2j9n_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j9n ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
| - | *[[Trypsin|Trypsin]] | + | *[[Trypsin 3D structures|Trypsin 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Bos taurus]] | [[Category: Bos taurus]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Benning | + | [[Category: Synthetic construct]] |
| - | [[Category: Carman | + | [[Category: Benning M]] |
| - | [[Category: Cudney | + | [[Category: Carman P]] |
| - | [[Category: Frankel | + | [[Category: Cudney R]] |
| - | [[Category: McPherson | + | [[Category: Frankel D]] |
| - | [[Category: Miller | + | [[Category: McPherson A]] |
| - | [[Category: Rupp | + | [[Category: Miller E]] |
| - | [[Category: Viola | + | [[Category: Rupp B]] |
| - | [[Category: Walsh | + | [[Category: Viola R]] |
| - | + | [[Category: Walsh J]] | |
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Current revision
Robotically harvested Trypsin complexed with Benzamidine containing polypeptide mediated crystal contacts
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Categories: Bos taurus | Large Structures | Synthetic construct | Benning M | Carman P | Cudney R | Frankel D | McPherson A | Miller E | Rupp B | Viola R | Walsh J
