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2jdm

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Current revision (14:44, 13 December 2023) (edit) (undo)
 
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<StructureSection load='2jdm' size='340' side='right'caption='[[2jdm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='2jdm' size='340' side='right'caption='[[2jdm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2jdm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JDM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2jdm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JDM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MFU:ALPHA-L-METHYL-FUCOSE'>MFU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1gzt|1gzt]], [[1our|1our]], [[1ous|1ous]], [[1oux|1oux]], [[1ovp|1ovp]], [[1ovs|1ovs]], [[1oxc|1oxc]], [[1uzv|1uzv]], [[1w43|1w43]], [[1w8f|1w8f]], [[1w8h|1w8h]], [[2boj|2boj]], [[2bp6|2bp6]], [[2jdh|2jdh]], [[2jdk|2jdk]], [[2jdn|2jdn]], [[2jdp|2jdp]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MFU:ALPHA-L-METHYL-FUCOSE'>MFU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jdm OCA], [https://pdbe.org/2jdm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jdm RCSB], [https://www.ebi.ac.uk/pdbsum/2jdm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jdm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jdm OCA], [https://pdbe.org/2jdm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jdm RCSB], [https://www.ebi.ac.uk/pdbsum/2jdm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jdm ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9HYN5_PSEAE Q9HYN5_PSEAE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Adam, J]]
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[[Category: Pseudomonas aeruginosa]]
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[[Category: Imberty, A]]
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[[Category: Adam J]]
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[[Category: Mitchell, E P]]
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[[Category: Imberty A]]
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[[Category: Pokorna, M]]
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[[Category: Mitchell EP]]
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[[Category: Sabin, C]]
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[[Category: Pokorna M]]
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[[Category: Wimmerova, M]]
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[[Category: Sabin C]]
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[[Category: Cystic fibrosis]]
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[[Category: Wimmerova M]]
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[[Category: Ectin]]
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[[Category: Glycomimetic]]
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[[Category: Lectin]]
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Current revision

Mutant (S22A) of Pseudomonas aeruginosa lectin II (PA-IIL) complexed with methyl-a-L-fucopyranoside

PDB ID 2jdm

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