2jgo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:47, 13 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jgo.png|left|200px]]
 
-
{{STRUCTURE_2jgo| PDB=2jgo | SCENE= }}
+
==Structure of the arsenated de novo designed peptide Coil Ser L9C==
 +
<StructureSection load='2jgo' size='340' side='right'caption='[[2jgo]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2jgo]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JGO FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ARS:ARSENIC'>ARS</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jgo OCA], [https://pdbe.org/2jgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jgo RCSB], [https://www.ebi.ac.uk/pdbsum/2jgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jgo ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Arsenic, a contaminant of water supplies worldwide, is one of the most toxic inorganic ions. Despite arsenic's health impact, there is relatively little structural detail known about its interactions with proteins. Bacteria such as Escherichia coli have evolved arsenic resistance using the Ars operon that is regulated by ArsR, a repressor protein that dissociates from DNA when As(III) binds. This protein undergoes a critical conformational change upon binding As(III) with three cysteine residues. Unfortunately, structures of ArsR with or without As(III) have not been reported. Alternatively, de novo designed peptides can bind As(III) in an endo configuration within a thiolate-rich environment consistent with that proposed for both ArsR and ArsD. We report the structure of the As(III) complex of Coil Ser L9C to a 1.8-A resolution, providing x-ray characterization of As(III) in a Tris thiolate protein environment and allowing a structural basis by which to understand arsenated ArsR.
-
===STUCTURE OF THE ARSENATED DE NOVO DESIGNED PEPTIDE COIL SER L9C===
+
Identifying important structural characteristics of arsenic resistance proteins by using designed three-stranded coiled coils.,Touw DS, Nordman CE, Stuckey JA, Pecoraro VL Proc Natl Acad Sci U S A. 2007 Jul 17;104(29):11969-74. Epub 2007 Jul 3. PMID:17609383<ref>PMID:17609383</ref>
-
{{ABSTRACT_PUBMED_17609383}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 2jgo" style="background-color:#fffaf0;"></div>
-
[[2jgo]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JGO OCA].
+
== References ==
-
 
+
<references/>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:017609383</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Nordman, C E.]]
+
[[Category: Large Structures]]
-
[[Category: Pecoraro, V L.]]
+
[[Category: Synthetic construct]]
-
[[Category: Stuckey, J A.]]
+
[[Category: Nordman CE]]
-
[[Category: Touw, D S.]]
+
[[Category: Pecoraro VL]]
-
[[Category: De novo design]]
+
[[Category: Stuckey JA]]
-
[[Category: De novo protein]]
+
[[Category: Touw DS]]
-
[[Category: Three-stranded coiled coil]]
+

Current revision

Structure of the arsenated de novo designed peptide Coil Ser L9C

PDB ID 2jgo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools