This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2vfp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:18, 13 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2vfp.png|left|200px]]
 
-
<!--
+
==Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V349L==
-
The line below this paragraph, containing "STRUCTURE_2vfp", creates the "Structure Box" on the page.
+
<StructureSection load='2vfp' size='340' side='right'caption='[[2vfp]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2vfp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_virus_P22 Salmonella virus P22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VFP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_2vfp| PDB=2vfp | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vfp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vfp OCA], [https://pdbe.org/2vfp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vfp RCSB], [https://www.ebi.ac.uk/pdbsum/2vfp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vfp ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FIBER_BPP22 FIBER_BPP22] Structural component of the short non-contractile tail. The tail comprises six fibers that mediate primary attachment to the host cell lipopolysaccharides (LPS) and display endorhamnosidase enzymatic activity, hydrolyzing the alpha-1,3-O-glycosidic linkage between rhamnose and galactose of the O-antigen polysaccharide. Digestion of the LPS brings the capsid near the cell outer membrane.<ref>PMID:12837775</ref> <ref>PMID:20817910</ref>
-
===LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109-666), MUTANT V349L===
+
==See Also==
-
 
+
*[[Tailspike protein 3D structures|Tailspike protein 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
2VFP is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p22 Enterobacteria phage p22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFP OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
[[Category: Large Structures]]
-
<ref group="xtra">PMID:10737931</ref><references group="xtra"/>
+
[[Category: Salmonella virus P22]]
-
[[Category: Enterobacteria phage p22]]
+
[[Category: Becker M]]
-
[[Category: Becker, M.]]
+
[[Category: Heinemann U]]
-
[[Category: Heinemann, U.]]
+
[[Category: Mueller JJ]]
-
[[Category: Mueller, J J.]]
+
[[Category: Seckler R]]
-
[[Category: Seckler, R.]]
+
-
[[Category: Endoglycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Late protein]]
+
-
[[Category: P22 tailspike protein]]
+
-
[[Category: Protein folding]]
+
-
[[Category: Protein stability]]
+
-
[[Category: Right-handed parallel beta-helix]]
+
-
[[Category: Salmonella bacteriophage p22]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jan 25 07:35:03 2009''
+

Current revision

Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V349L

PDB ID 2vfp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools