This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2vk3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:22, 13 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2vk3' size='340' side='right'caption='[[2vk3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='2vk3' size='340' side='right'caption='[[2vk3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2vk3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VK3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VK3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2vk3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VK3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VK3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DTU:(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL'>DTU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vk3 OCA], [http://pdbe.org/2vk3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vk3 RCSB], [http://www.ebi.ac.uk/pdbsum/2vk3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vk3 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTU:(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL'>DTU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vk3 OCA], [https://pdbe.org/2vk3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vk3 RCSB], [https://www.ebi.ac.uk/pdbsum/2vk3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vk3 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PROF2_RAT PROF2_RAT] Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 28: Line 31:
==See Also==
==See Also==
-
*[[Profilin|Profilin]]
+
*[[Profilin 3D Structures|Profilin 3D Structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Haikarainen, T]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Kursula, P]]
+
[[Category: Haikarainen T]]
-
[[Category: Acetylation]]
+
[[Category: Kursula P]]
-
[[Category: Actin-binding]]
+
-
[[Category: Alternative splicing]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Cytoskeleton]]
+
-
[[Category: Disulfide bridge]]
+
-
[[Category: Profilin]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Protein-binding]]
+

Current revision

Crystal structure of rat profilin 2a

PDB ID 2vk3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools