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2vyw
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| - | <StructureSection load='2vyw' size='340' side='right' caption='[[2vyw]], [[Resolution|resolution]] 1.80Å' scene=''> | + | ==Hemoglobin (Hb2) from trematode Fasciola hepatica== |
| + | <StructureSection load='2vyw' size='340' side='right'caption='[[2vyw]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2vyw]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2vyw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fasciola_hepatica Fasciola hepatica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VYW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VYW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vyw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vyw OCA], [https://pdbe.org/2vyw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vyw RCSB], [https://www.ebi.ac.uk/pdbsum/2vyw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vyw ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/2vyw_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vy/2vyw_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vyw ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2vyw" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Fasciola hepatica]] | [[Category: Fasciola hepatica]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Bolognesi M]] |
| - | [[Category: | + | [[Category: Dewilde S]] |
| - | [[Category: Gilany | + | [[Category: Gilany K]] |
| - | [[Category: Ioanitescu | + | [[Category: Ioanitescu AI]] |
| - | [[Category: Kiger | + | [[Category: Kiger L]] |
| - | [[Category: Marden | + | [[Category: Marden MC]] |
| - | [[Category: Moens | + | [[Category: Moens L]] |
| - | [[Category: Nardini | + | [[Category: Nardini M]] |
| - | [[Category: Pesce | + | [[Category: Pesce A]] |
| - | [[Category: | + | [[Category: Van Doorslaer S]] |
| - | [[Category: | + | [[Category: Vercruysse J]] |
| - | + | ||
| - | + | ||
Current revision
Hemoglobin (Hb2) from trematode Fasciola hepatica
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Categories: Fasciola hepatica | Large Structures | Bolognesi M | Dewilde S | Gilany K | Ioanitescu AI | Kiger L | Marden MC | Moens L | Nardini M | Pesce A | Van Doorslaer S | Vercruysse J
