This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2wh5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:56, 13 December 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2wh5.png|left|200px]]
 
-
<!--
+
==Crystal structure of human acyl-CoA binding domain 4 complexed with stearoyl-CoA==
-
The line below this paragraph, containing "STRUCTURE_2wh5", creates the "Structure Box" on the page.
+
<StructureSection load='2wh5' size='340' side='right'caption='[[2wh5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2wh5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WH5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=ST9:STEAROYL-COENZYME+A'>ST9</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
-
{{STRUCTURE_2wh5| PDB=2wh5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wh5 OCA], [https://pdbe.org/2wh5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wh5 RCSB], [https://www.ebi.ac.uk/pdbsum/2wh5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wh5 ProSAT]</span></td></tr>
-
 
+
</table>
-
===CRYSTAL STRUCTURE OF HUMAN ACYL-COA BINDING DOMAIN 4 COMPLEXED WITH STEAROYL-COA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ACBD4_HUMAN ACBD4_HUMAN] Binds medium- and long-chain acyl-CoA esters and may function as an intracellular carrier of acyl-CoA esters.
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2wh5]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WH5 OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wh/2wh5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wh5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C.]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C.]]
+
[[Category: Arrowsmith C]]
-
[[Category: Chaikuad, A.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A.]]
+
[[Category: Chaikuad A]]
-
[[Category: Johansson, C.]]
+
[[Category: Edwards A]]
-
[[Category: Oppermann, U.]]
+
[[Category: Johansson C]]
-
[[Category: Roos, A K.]]
+
[[Category: Oppermann U]]
-
[[Category: Salah, E.]]
+
[[Category: Roos AK]]
-
[[Category: Savitsky, P.]]
+
[[Category: Salah E]]
-
[[Category: Shafqat, N.]]
+
[[Category: Savitsky P]]
-
[[Category: Ugochukwu, E.]]
+
[[Category: Shafqat N]]
-
[[Category: Vondelft, F.]]
+
[[Category: Ugochukwu E]]
-
[[Category: Weigelt, J.]]
+
[[Category: Weigelt J]]
-
[[Category: Yue, W W.]]
+
[[Category: Yue WW]]
-
[[Category: Acyl-coa binding]]
+
[[Category: Von Delft F]]
-
[[Category: Alternative splicing]]
+
-
[[Category: Fatty acid metabolism]]
+
-
[[Category: Lipid binding protein]]
+
-
[[Category: Lipid transport]]
+

Current revision

Crystal structure of human acyl-CoA binding domain 4 complexed with stearoyl-CoA

PDB ID 2wh5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools