This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2wlq
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Nucleophile-disabled Lam16A mutant holds laminariheptaose (L7) in a cyclical conformation== | ==Nucleophile-disabled Lam16A mutant holds laminariheptaose (L7) in a cyclical conformation== | ||
| - | <StructureSection load='2wlq' size='340' side='right' caption='[[2wlq]], [[Resolution|resolution]] 1.40Å' scene=''> | + | <StructureSection load='2wlq' size='340' side='right'caption='[[2wlq]], [[Resolution|resolution]] 1.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2wlq]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2wlq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WLQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WLQ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wlq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wlq OCA], [https://pdbe.org/2wlq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wlq RCSB], [https://www.ebi.ac.uk/pdbsum/2wlq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wlq ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q874E3_PHACH Q874E3_PHACH] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/2wlq_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/2wlq_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 32: | Line 33: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Andersson | + | [[Category: Large Structures]] |
| - | [[Category: Engstrom | + | [[Category: Phanerodontia chrysosporium]] |
| - | [[Category: Hansson | + | [[Category: Andersson E]] |
| - | [[Category: Igarashi | + | [[Category: Engstrom A]] |
| - | [[Category: Jonsson | + | [[Category: Hansson H]] |
| - | [[Category: Kawai | + | [[Category: Igarashi K]] |
| - | [[Category: Samejima | + | [[Category: Jonsson KH]] |
| - | [[Category: Sandgren | + | [[Category: Kawai R]] |
| - | [[Category: Stahlberg | + | [[Category: Samejima M]] |
| - | [[Category: Vasur | + | [[Category: Sandgren M]] |
| - | [[Category: Widmalm | + | [[Category: Stahlberg J]] |
| - | + | [[Category: Vasur J]] | |
| - | + | [[Category: Widmalm G]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Nucleophile-disabled Lam16A mutant holds laminariheptaose (L7) in a cyclical conformation
| |||||||||||

