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5oq2

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Current revision (16:57, 13 December 2023) (edit) (undo)
 
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==Se-SAD structure of the functional region of Cwp19 from Clostridium difficile==
==Se-SAD structure of the functional region of Cwp19 from Clostridium difficile==
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<StructureSection load='5oq2' size='340' side='right' caption='[[5oq2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='5oq2' size='340' side='right'caption='[[5oq2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5oq2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_difficilis"_hall_and_o'toole_1935 "bacillus difficilis" hall and o'toole 1935]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OQ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OQ2 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5oq2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile Clostridioides difficile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OQ2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lytC_21, cwp19, lytC_5, SAMEA3374989_00994, SAMEA3375004_02322 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1496 "Bacillus difficilis" Hall and O'Toole 1935])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5oq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5oq2 OCA], [https://pdbe.org/5oq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5oq2 RCSB], [https://www.ebi.ac.uk/pdbsum/5oq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5oq2 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylmuramoyl-L-alanine_amidase N-acetylmuramoyl-L-alanine amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.28 3.5.1.28] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5oq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5oq2 OCA], [http://pdbe.org/5oq2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5oq2 RCSB], [http://www.ebi.ac.uk/pdbsum/5oq2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5oq2 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/L7PGA3_CLODI L7PGA3_CLODI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus difficilis hall and o'toole 1935]]
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[[Category: Clostridioides difficile]]
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[[Category: N-acetylmuramoyl-L-alanine amidase]]
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[[Category: Large Structures]]
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[[Category: Acharya, K R]]
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[[Category: Acharya KR]]
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[[Category: Bradshaw, W J]]
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[[Category: Bradshaw WJ]]
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[[Category: Kirby, J M]]
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[[Category: Kirby JM]]
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[[Category: Roberts, A K]]
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[[Category: Roberts AK]]
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[[Category: Shone, C C]]
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[[Category: Shone CC]]
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[[Category: Glycoside hydrolase]]
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[[Category: Hydrolase]]
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[[Category: S-layer]]
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[[Category: Tim barrel]]
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Current revision

Se-SAD structure of the functional region of Cwp19 from Clostridium difficile

PDB ID 5oq2

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