This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:11, 20 December 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jr7.png|left|200px]]
 
-
{{STRUCTURE_2jr7| PDB=2jr7 | SCENE= }}
+
==Solution structure of human DESR1==
-
 
+
<StructureSection load='2jr7' size='340' side='right'caption='[[2jr7]]' scene=''>
-
===Solution structure of human DESR1===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2jr7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JR7 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[2jr7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JR7 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jr7 OCA], [https://pdbe.org/2jr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jr7 RCSB], [https://www.ebi.ac.uk/pdbsum/2jr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jr7 ProSAT]</span></td></tr>
-
 
+
</table>
-
==Reference==
+
== Function ==
-
<ref group="xtra">PMID:018214955</ref><references group="xtra"/>
+
[https://www.uniprot.org/uniprot/DPH3_HUMAN DPH3_HUMAN] Essential for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in elongation factor 2 and which can be ADP-ribosylated by diphtheria toxin and by Pseudomonas exotoxin A (By similarity).<ref>PMID:14980502</ref> <ref>PMID:14527407</ref> Down-regulation increases extracellular release of proteoglycans, indicating a possible role in the secretion process. Stimulates binding of GNEFR to SEC5.<ref>PMID:14980502</ref> <ref>PMID:14527407</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jr7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jr7 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Shi, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Wu, F.]]
+
[[Category: Shi Y]]
-
[[Category: Wu, J.]]
+
[[Category: Wu F]]
-
[[Category: Csl zinc finger]]
+
[[Category: Wu J]]
-
[[Category: Desr1]]
+
-
[[Category: Metal binding protein]]
+

Current revision

Solution structure of human DESR1

PDB ID 2jr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools