This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2x00

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:20, 20 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==CRYSTAL STRUCTURE OF A-ACHBP IN COMPLEX WITH GYMNODIMINE A==
==CRYSTAL STRUCTURE OF A-ACHBP IN COMPLEX WITH GYMNODIMINE A==
-
<StructureSection load='2x00' size='340' side='right' caption='[[2x00]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='2x00' size='340' side='right'caption='[[2x00]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x00]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X00 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X00 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x00]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X00 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GYN:GYMNODIMINE+A'>GYN</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wn9|2wn9]], [[2w8f|2w8f]], [[2byp|2byp]], [[2c9t|2c9t]], [[2byq|2byq]], [[2w8g|2w8g]], [[2uz6|2uz6]], [[2wnl|2wnl]], [[2br7|2br7]], [[2br8|2br8]], [[2byr|2byr]], [[2byn|2byn]], [[2bys|2bys]], [[2wnj|2wnj]], [[2w8e|2w8e]], [[2wzy|2wzy]], [[2wnc|2wnc]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GYN:GYMNODIMINE+A'>GYN</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x00 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2x00 RCSB], [http://www.ebi.ac.uk/pdbsum/2x00 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x00 OCA], [https://pdbe.org/2x00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x00 RCSB], [https://www.ebi.ac.uk/pdbsum/2x00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x00 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8WSF8_APLCA Q8WSF8_APLCA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x0/2x00_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x0/2x00_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x00 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2x00" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Acetylcholine binding protein|Acetylcholine binding protein]]
+
*[[Acetylcholine binding protein 3D structures|Acetylcholine binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 33: Line 37:
</StructureSection>
</StructureSection>
[[Category: Aplysia californica]]
[[Category: Aplysia californica]]
-
[[Category: Araoz, R.]]
+
[[Category: Large Structures]]
-
[[Category: Benoit, E.]]
+
[[Category: Araoz R]]
-
[[Category: Bourne, Y.]]
+
[[Category: Benoit E]]
-
[[Category: Marchot, P.]]
+
[[Category: Bourne Y]]
-
[[Category: Molgo, J.]]
+
[[Category: Marchot P]]
-
[[Category: Radic, Z.]]
+
[[Category: Molgo J]]
-
[[Category: Servent, D.]]
+
[[Category: Radic Z]]
-
[[Category: Talley, T T.]]
+
[[Category: Servent D]]
-
[[Category: Taylor, P.]]
+
[[Category: Talley TT]]
-
[[Category: Acetylcholine binding protein]]
+
[[Category: Taylor P]]
-
[[Category: Phycotoxin]]
+
-
[[Category: Receptor]]
+
-
[[Category: Toxin]]
+

Current revision

CRYSTAL STRUCTURE OF A-ACHBP IN COMPLEX WITH GYMNODIMINE A

PDB ID 2x00

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2x00"
Personal tools