This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2x9x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:27, 20 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE==
==STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE==
-
<StructureSection load='2x9x' size='340' side='right' caption='[[2x9x]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='2x9x' size='340' side='right'caption='[[2x9x]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x9x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X9X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x9x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X9X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X9X FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2x9z|2x9z]], [[2x9w|2x9w]], [[2x9y|2x9y]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x9x OCA], [https://pdbe.org/2x9x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x9x RCSB], [https://www.ebi.ac.uk/pdbsum/2x9x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x9x ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x9x OCA], [http://pdbe.org/2x9x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2x9x RCSB], [http://www.ebi.ac.uk/pdbsum/2x9x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2x9x ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H2UNM7_STRPN A0A0H2UNM7_STRPN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Strpn]]
+
[[Category: Large Structures]]
-
[[Category: Barocchi, M A]]
+
[[Category: Streptococcus pneumoniae TIGR4]]
-
[[Category: Biagini, M]]
+
[[Category: Barocchi MA]]
-
[[Category: Covacci, A]]
+
[[Category: Biagini M]]
-
[[Category: Emolo, C]]
+
[[Category: Covacci A]]
-
[[Category: Ferlenghi, I]]
+
[[Category: Emolo C]]
-
[[Category: Giusti, F]]
+
[[Category: Ferlenghi I]]
-
[[Category: Hilleringmann, M]]
+
[[Category: Giusti F]]
-
[[Category: Koesema, E]]
+
[[Category: Hilleringmann M]]
-
[[Category: Lesley, S]]
+
[[Category: Koesema E]]
-
[[Category: Malito, E]]
+
[[Category: Lesley S]]
-
[[Category: Masignani, V]]
+
[[Category: Malito E]]
-
[[Category: Norais, N]]
+
[[Category: Masignani V]]
-
[[Category: Rappuoli, R]]
+
[[Category: Norais N]]
-
[[Category: Scarselli, M]]
+
[[Category: Rappuoli R]]
-
[[Category: Spraggon, G]]
+
[[Category: Scarselli M]]
-
[[Category: Cell adhesion]]
+
[[Category: Spraggon G]]

Current revision

STRUCTURE OF THE PILUS BACKBONE (RRGB) FROM STREPTOCOCCUS PNEUMONIAE

PDB ID 2x9x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools