This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2xii
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='2xii' size='340' side='right'caption='[[2xii]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='2xii' size='340' side='right'caption='[[2xii]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2xii]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2xii]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XII OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XII FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TA9:9-OXO-N-[[(2R,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-METHYL-PIPERIDIN-2-YL]METHYL]FLUORENE-1-CARBOXAMIDE'>TA9</scene>, <scene name='pdbligand=TYR:TYROSINE'>TYR</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TA9:9-OXO-N-[[(2R,3R,4R,5R,6S)-3,4,5-TRIHYDROXY-6-METHYL-PIPERIDIN-2-YL]METHYL]FLUORENE-1-CARBOXAMIDE'>TA9</scene>, <scene name='pdbligand=TYR:TYROSINE'>TYR</scene></td></tr> | |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xii OCA], [https://pdbe.org/2xii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xii RCSB], [https://www.ebi.ac.uk/pdbsum/2xii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xii ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xii OCA], [https://pdbe.org/2xii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xii RCSB], [https://www.ebi.ac.uk/pdbsum/2xii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xii ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8A3I4_BACTN Q8A3I4_BACTN] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 21: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bacteroides thetaiotaomicron]] |
| - | + | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Davies GJ]] |
| - | [[Category: | + | [[Category: Lammerts van Bueren A]] |
| - | [[Category: Lin | + | [[Category: Lin CH]] |
| - | [[Category: Popat | + | [[Category: Popat SD]] |
| - | + | ||
| - | + | ||
Current revision
CRYSTAL STRUCTURE OF AN ALPHA-L-FUCOSIDASE GH29 FROM BACTEROIDES THETAIOTAOMICRON IN COMPLEX WITH AN EXTENDED 9-FLUORENONE IMINOSUGAR INHIBITOR
| |||||||||||
