This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2xj8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:32, 20 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2xj8' size='340' side='right'caption='[[2xj8]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
<StructureSection load='2xj8' size='340' side='right'caption='[[2xj8]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2xj8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XJ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XJ8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2xj8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XJ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XJ8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1cpg|1cpg]], [[1bva|1bva]], [[2v23|2v23]], [[3ccx|3ccx]], [[6ccp|6ccp]], [[1aeu|1aeu]], [[1dcc|1dcc]], [[1s6v|1s6v]], [[1bej|1bej]], [[1ml2|1ml2]], [[1ccl|1ccl]], [[1beq|1beq]], [[1jci|1jci]], [[1aem|1aem]], [[1u74|1u74]], [[2b10|2b10]], [[2pcc|2pcc]], [[1aeb|1aeb]], [[1cpd|1cpd]], [[1ccg|1ccg]], [[1cca|1cca]], [[1ac4|1ac4]], [[1aeo|1aeo]], [[1cmu|1cmu]], [[1bep|1bep]], [[1aet|1aet]], [[1aeh|1aeh]], [[1aev|1aev]], [[2pcb|2pcb]], [[1kxn|1kxn]], [[1aen|1aen]], [[1aeg|1aeg]], [[4ccp|4ccp]], [[5ccp|5ccp]], [[2x07|2x07]], [[2cep|2cep]], [[1cmp|1cmp]], [[1cce|1cce]], [[1ryc|1ryc]], [[2b0z|2b0z]], [[1bes|1bes]], [[1dsp|1dsp]], [[1z53|1z53]], [[2b12|2b12]], [[1bem|1bem]], [[1mkr|1mkr]], [[1sog|1sog]], [[1ccj|1ccj]], [[1aee|1aee]], [[1a2f|1a2f]], [[1cpe|1cpe]], [[1dse|1dse]], [[1jdr|1jdr]], [[1a2g|1a2g]], [[1aes|1aes]], [[1zbz|1zbz]], [[1bek|1bek]], [[1mkq|1mkq]], [[1cck|1cck]], [[1mk8|1mk8]], [[1ebe|1ebe]], [[1cci|1cci]], [[1krj|1krj]], [[2b11|2b11]], [[1cyf|1cyf]], [[1aef|1aef]], [[1aek|1aek]], [[1ccb|1ccb]], [[1u75|1u75]], [[1ac8|1ac8]], [[1dsg|1dsg]], [[1dj1|1dj1]], [[1dj5|1dj5]], [[2ccp|2ccp]], [[1cmt|1cmt]], [[1aej|1aej]], [[7ccp|7ccp]], [[1ds4|1ds4]], [[1aeq|1aeq]], [[1sdq|1sdq]], [[2x08|2x08]], [[2gb8|2gb8]], [[4ccx|4ccx]], [[1kxm|1kxm]], [[2xj5|2xj5]], [[1kok|1kok]], [[1bj9|1bj9]], [[2bcn|2bcn]], [[1ccp|1ccp]], [[1zby|1zby]], [[2cyp|2cyp]], [[1dso|1dso]], [[1stq|1stq]], [[3ccp|3ccp]], [[2v2e|2v2e]], [[2xil|2xil]], [[1aa4|1aa4]], [[1aed|1aed]], [[1ccc|1ccc]], [[1cmq|1cmq]], [[1cpf|1cpf]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xj8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xj8 OCA], [https://pdbe.org/2xj8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xj8 RCSB], [https://www.ebi.ac.uk/pdbsum/2xj8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xj8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xj8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xj8 OCA], [http://pdbe.org/2xj8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xj8 RCSB], [http://www.ebi.ac.uk/pdbsum/2xj8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xj8 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CCPR_YEAST CCPR_YEAST]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
+
[https://www.uniprot.org/uniprot/CCPR_YEAST CCPR_YEAST] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
 
-
[[Category: Cytochrome-c peroxidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Gumiero, A]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Moody, P C.E]]
+
[[Category: Gumiero A]]
-
[[Category: Raven, E L]]
+
[[Category: Moody PCE]]
-
[[Category: Ascorbate peroxidase]]
+
[[Category: Raven EL]]
-
[[Category: Ferrous heme]]
+
-
[[Category: Ferryl ion]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

The structure of ferrous cytochrome c peroxidase

PDB ID 2xj8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools