This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kam

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:50, 20 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==NMR structure of delta-toxin from Staphylococcus aureus in CD3OH==
==NMR structure of delta-toxin from Staphylococcus aureus in CD3OH==
-
<StructureSection load='2kam' size='340' side='right'caption='[[2kam]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2kam' size='340' side='right'caption='[[2kam]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2kam]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KAM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2KAM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2kam]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KAM FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1dtc|1dtc]], [[2dtb|2dtb]], [[1dhl|1dhl]], [[2dhl|2dhl]], [[3dhl|3dhl]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2kam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kam OCA], [http://pdbe.org/2kam PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kam RCSB], [http://www.ebi.ac.uk/pdbsum/2kam PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kam ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kam OCA], [https://pdbe.org/2kam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kam RCSB], [https://www.ebi.ac.uk/pdbsum/2kam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kam ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HLD_STAAU HLD_STAAU]] Lyses erythrocytes and many other mammalian cells.
+
[https://www.uniprot.org/uniprot/HLD_STAAU HLD_STAAU] Lyses erythrocytes and many other mammalian cells.
==See Also==
==See Also==
Line 17: Line 17:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Brito, R M.M]]
+
[[Category: Brito RMM]]
-
[[Category: Loureiro-Ferreira, N]]
+
[[Category: Loureiro-Ferreira N]]
-
[[Category: Rodrigues, J]]
+
[[Category: Rodrigues J]]
-
[[Category: Cytolysis]]
+
-
[[Category: Cytolytic]]
+
-
[[Category: Formylation]]
+
-
[[Category: Hemolysis]]
+
-
[[Category: Membrane]]
+
-
[[Category: Secreted]]
+
-
[[Category: Toxin]]
+
-
[[Category: Transmembrane]]
+

Current revision

NMR structure of delta-toxin from Staphylococcus aureus in CD3OH

PDB ID 2kam

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools