This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ixk
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1ixk" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ixk, resolution 1.9Å" /> '''Crystal Structure Ana...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1ixk.gif|left|200px]]<br /><applet load="1ixk" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1ixk, resolution 1.9Å" /> | ||
| - | '''Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii'''<br /> | ||
| - | == | + | ==Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii== |
| - | + | <StructureSection load='1ixk' size='340' side='right'caption='[[1ixk]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[1ixk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IXK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IXK FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ixk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ixk OCA], [https://pdbe.org/1ixk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ixk RCSB], [https://www.ebi.ac.uk/pdbsum/1ixk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ixk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O50082_PYRHO O50082_PYRHO] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/1ixk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ixk ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Pyrococcus horikoshii]] | [[Category: Pyrococcus horikoshii]] | ||
| - | + | [[Category: Ishikawa I]] | |
| - | [[Category: Ishikawa | + | [[Category: Sakai N]] |
| - | [[Category: Sakai | + | [[Category: Tamura T]] |
| - | [[Category: Tamura | + | [[Category: Tanaka I]] |
| - | [[Category: Tanaka | + | [[Category: Watanabe N]] |
| - | [[Category: Watanabe | + | [[Category: Yao M]] |
| - | [[Category: Yao | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii
| |||||||||||
