1j27

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:41, 27 December 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1j27.jpg|left|200px]]<br /><applet load="1j27" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1j27, resolution 1.70&Aring;" />
 
-
'''Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution==
-
1J27 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J27 OCA].
+
<StructureSection load='1j27' size='340' side='right'caption='[[1j27]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1j27]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J27 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J27 FirstGlance]. <br>
-
Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7 A resolution., Seto A, Shirouzu M, Terada T, Murayama K, Kuramitsu S, Yokoyama S, Proteins. 2003 Nov 15;53(3):768-71. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=14579367 14579367]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
[[Category: Single protein]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j27 OCA], [https://pdbe.org/1j27 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j27 RCSB], [https://www.ebi.ac.uk/pdbsum/1j27 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j27 ProSAT], [https://www.topsan.org/Proteins/RSGI/1j27 TOPSAN]</span></td></tr>
-
[[Category: Thermus thermophilus]]
+
</table>
-
[[Category: Kuramitsu, S.]]
+
== Function ==
-
[[Category: Murayama, K.]]
+
[https://www.uniprot.org/uniprot/Q84BR1_THETH Q84BR1_THETH]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
== Evolutionary Conservation ==
-
[[Category: Seto, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Shirouzu, M.]]
+
Check<jmol>
-
[[Category: Terada, T.]]
+
<jmolCheckbox>
-
[[Category: Yokoyama, S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j27_consurf.spt"</scriptWhenChecked>
-
[[Category: hypothetical protein from thermus thermophilus hb8]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: mad]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: riken structural genomics/proteomics initiative]]
+
</jmolCheckbox>
-
[[Category: rsgi]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j27 ConSurf].
-
[[Category: structural genomics]]
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:18:13 2008''
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermus thermophilus HB8]]
 +
[[Category: Kuramitsu S]]
 +
[[Category: Murayama K]]
 +
[[Category: Seto A]]
 +
[[Category: Shirouzu M]]
 +
[[Category: Terada T]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution

PDB ID 1j27

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools