This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1uh6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:53, 27 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1uh6.jpg|left|200px]]
 
-
<!--
+
==Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06==
-
The line below this paragraph, containing "STRUCTURE_1uh6", creates the "Structure Box" on the page.
+
<StructureSection load='1uh6' size='340' side='right'caption='[[1uh6]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1uh6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UH6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uh6 OCA], [https://pdbe.org/1uh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uh6 RCSB], [https://www.ebi.ac.uk/pdbsum/1uh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uh6 ProSAT], [https://www.topsan.org/Proteins/RSGI/1uh6 TOPSAN]</span></td></tr>
-
{{STRUCTURE_1uh6| PDB=1uh6 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06'''
+
[https://www.uniprot.org/uniprot/UBL5_MOUSE UBL5_MOUSE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1UH6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UH6 OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uh/1uh6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uh6 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Single protein]]
+
[[Category: Aoki M]]
-
[[Category: Aoki, M.]]
+
[[Category: Arakawa T]]
-
[[Category: Arakawa, T.]]
+
[[Category: Carninci P]]
-
[[Category: Carninci, P.]]
+
[[Category: Hayashi F]]
-
[[Category: Hayashi, F.]]
+
[[Category: Hayashizaki Y]]
-
[[Category: Hayashizaki, Y.]]
+
[[Category: Hirota H]]
-
[[Category: Hirota, H.]]
+
[[Category: Inoue M]]
-
[[Category: Inoue, M.]]
+
[[Category: Kawai J]]
-
[[Category: Kawai, J.]]
+
[[Category: Kigawa T]]
-
[[Category: Kigawa, T.]]
+
[[Category: Matsuda T]]
-
[[Category: Matsuda, T.]]
+
[[Category: Osanai T]]
-
[[Category: Osanai, T.]]
+
[[Category: Seki E]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Shirouzu M]]
-
[[Category: Seki, E.]]
+
[[Category: Tanaka A]]
-
[[Category: Shirouzu, M.]]
+
[[Category: Terada T]]
-
[[Category: Tanaka, A.]]
+
[[Category: Yabuki T]]
-
[[Category: Terada, T.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yabuki, T.]]
+
[[Category: Yoshida M]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Yoshida, M.]]
+
-
[[Category: Beta-grasp fold]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 11:13:27 2008''
+

Current revision

Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06

PDB ID 1uh6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools