This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1um4
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Catalytic Antibody 21H3 with hapten== | ==Catalytic Antibody 21H3 with hapten== | ||
| - | <StructureSection load='1um4' size='340' side='right' caption='[[1um4]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='1um4' size='340' side='right'caption='[[1um4]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1um4]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1um4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UM4 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SH4:(1R)-1-PHENYLETHYL+4-(ACETYLAMINO)BENZYLPHOSPHONATE'>SH4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1um4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1um4 OCA], [https://pdbe.org/1um4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1um4 RCSB], [https://www.ebi.ac.uk/pdbsum/1um4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1um4 ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q6PYX1_HUMAN Q6PYX1_HUMAN] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/um/1um4_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/um/1um4_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 19: | Line 22: | ||
==See Also== | ==See Also== | ||
| - | *[[Monoclonal | + | *[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Mus musculus]] |
| - | [[Category: Janda | + | [[Category: Beuscher IV AE]] |
| - | [[Category: Lerner | + | [[Category: Janda KD]] |
| - | [[Category: Olson | + | [[Category: Lerner RA]] |
| - | [[Category: Reuter | + | [[Category: Olson AJ]] |
| - | [[Category: Romesberg | + | [[Category: Reuter J]] |
| - | [[Category: Schultz | + | [[Category: Romesberg FE]] |
| - | [[Category: Stevens | + | [[Category: Schultz PG]] |
| - | [[Category: Wirsching | + | [[Category: Stevens RC]] |
| - | + | [[Category: Wirsching P]] | |
| - | + | ||
Current revision
Catalytic Antibody 21H3 with hapten
| |||||||||||
Categories: Large Structures | Mus musculus | Beuscher IV AE | Janda KD | Lerner RA | Olson AJ | Reuter J | Romesberg FE | Schultz PG | Stevens RC | Wirsching P

