1v2b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:56, 27 December 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of PsbP Protein in the Oxygen-Evolving Complex of Photosystem II from Higher Plants==
==Crystal Structure of PsbP Protein in the Oxygen-Evolving Complex of Photosystem II from Higher Plants==
-
<StructureSection load='1v2b' size='340' side='right' caption='[[1v2b]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='1v2b' size='340' side='right'caption='[[1v2b]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1v2b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V2B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V2B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1v2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V2B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">psbp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4097 Nicotiana tabacum])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v2b OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1v2b RCSB], [http://www.ebi.ac.uk/pdbsum/1v2b PDBsum], [http://www.topsan.org/Proteins/RSGI/1v2b TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v2b OCA], [https://pdbe.org/1v2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v2b RCSB], [https://www.ebi.ac.uk/pdbsum/1v2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v2b ProSAT], [https://www.topsan.org/Proteins/RSGI/1v2b TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PSBP2_TOBAC PSBP2_TOBAC]] May be involved in the regulation of photosystem II.
+
[https://www.uniprot.org/uniprot/PSBP2_TOBAC PSBP2_TOBAC] May be involved in the regulation of photosystem II.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v2/1v2b_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v2/1v2b_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v2b ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 27: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1v2b" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Photosystem II|Photosystem II]]
+
*[[Photosystem II 3D structures|Photosystem II 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Nicotiana tabacum]]
[[Category: Nicotiana tabacum]]
-
[[Category: Ifuku, K]]
+
[[Category: Ifuku K]]
-
[[Category: Kato, H]]
+
[[Category: Kato H]]
-
[[Category: Nakatsu, T]]
+
[[Category: Nakatsu T]]
-
[[Category: Structural genomic]]
+
[[Category: Sato F]]
-
[[Category: Sato, F]]
+
-
[[Category: Alpha-beta]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Rsgi]]
+

Current revision

Crystal Structure of PsbP Protein in the Oxygen-Evolving Complex of Photosystem II from Higher Plants

PDB ID 1v2b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1v2b"
Personal tools