This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1v4x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:57, 27 December 2023) (edit) (undo)
 
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1v4x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thunnus_thynnus Thunnus thynnus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V4X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V4X FirstGlance]. <br>
<table><tr><td colspan='2'>[[1v4x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thunnus_thynnus Thunnus thynnus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V4X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V4X FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1v4u|1v4u]], [[1v4w|1v4w]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v4x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v4x OCA], [https://pdbe.org/1v4x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v4x RCSB], [https://www.ebi.ac.uk/pdbsum/1v4x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v4x ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v4x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v4x OCA], [https://pdbe.org/1v4x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v4x RCSB], [https://www.ebi.ac.uk/pdbsum/1v4x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v4x ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8AYM0_THUTH Q8AYM0_THUTH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 38:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Thunnus thynnus]]
[[Category: Thunnus thynnus]]
-
[[Category: Chong, K T]]
+
[[Category: Chong KT]]
-
[[Category: Jeremy, R H.T]]
+
[[Category: Jeremy RHT]]
-
[[Category: Miyazaki, G]]
+
[[Category: Miyazaki G]]
-
[[Category: Miyazaki, Y]]
+
[[Category: Miyazaki Y]]
-
[[Category: Morimoto, H]]
+
[[Category: Morimoto H]]
-
[[Category: Nakatsukasa, T]]
+
[[Category: Nakatsukasa T]]
-
[[Category: Park, S Y]]
+
[[Category: Park SY]]
-
[[Category: Unzai, S]]
+
[[Category: Unzai S]]
-
[[Category: Yokoyama, T]]
+
[[Category: Yokoyama T]]
-
[[Category: Erythrocyte]]
+
-
[[Category: Heme]]
+
-
[[Category: Oxygen storage-transport complex]]
+
-
[[Category: Oxygen transport]]
+
-
[[Category: Respiratory protein]]
+
-
[[Category: Root effect]]
+
-
[[Category: Swim bladder]]
+

Current revision

Crystal structure of bluefin tuna hemoglobin deoxy form at pH5.0

PDB ID 1v4x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1v4x"
Personal tools