This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1v5i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:57, 27 December 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1v5i.gif|left|200px]]
 
-
<!--
+
==Crystal structure of serine protease inhibitor POIA1 in complex with subtilisin BPN'==
-
The line below this paragraph, containing "STRUCTURE_1v5i", creates the "Structure Box" on the page.
+
<StructureSection load='1v5i' size='340' side='right'caption='[[1v5i]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1v5i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens] and [https://en.wikipedia.org/wiki/Pleurotus_ostreatus Pleurotus ostreatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V5I FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1v5i| PDB=1v5i | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5i OCA], [https://pdbe.org/1v5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v5i RCSB], [https://www.ebi.ac.uk/pdbsum/1v5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v5i ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PIA1_PLEOS PIA1_PLEOS]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5i_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v5i ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of serine protease inhibitor POIA1 in complex with subtilisin BPN''''
+
==See Also==
-
 
+
*[[Subtilisin 3D structures|Subtilisin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1V5I is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens] and [http://en.wikipedia.org/wiki/Pleurotus_ostreatus Pleurotus ostreatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5I OCA].
+
[[Category: Bacillus amyloliquefaciens]]
[[Category: Bacillus amyloliquefaciens]]
 +
[[Category: Large Structures]]
[[Category: Pleurotus ostreatus]]
[[Category: Pleurotus ostreatus]]
-
[[Category: Protein complex]]
+
[[Category: Kikkawa M]]
-
[[Category: Subtilisin]]
+
[[Category: Kojima S]]
-
[[Category: Kikkawa, M.]]
+
[[Category: Lee WC]]
-
[[Category: Kojima, S.]]
+
[[Category: Miura K]]
-
[[Category: Lee, W C.]]
+
[[Category: Tanokura M]]
-
[[Category: Miura, K.]]
+
-
[[Category: Tanokura, M.]]
+
-
[[Category: Poia1]]
+
-
[[Category: Protease-inhibitor complex]]
+
-
[[Category: Subtilisin]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 12:06:14 2008''
+

Current revision

Crystal structure of serine protease inhibitor POIA1 in complex with subtilisin BPN'

PDB ID 1v5i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1v5i"
Personal tools