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1vae
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1vae" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vae" /> '''Solution structure of the PDZ domain of mous...) |
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| - | [[Image:1vae.gif|left|200px]]<br /><applet load="1vae" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vae" /> | ||
| - | '''Solution structure of the PDZ domain of mouse Rhophilin-2'''<br /> | ||
| - | == | + | ==Solution structure of the PDZ domain of mouse Rhophilin-2== |
| - | + | <StructureSection load='1vae' size='340' side='right'caption='[[1vae]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1vae]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VAE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VAE FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vae FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vae OCA], [https://pdbe.org/1vae PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vae RCSB], [https://www.ebi.ac.uk/pdbsum/1vae PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vae ProSAT], [https://www.topsan.org/Proteins/RSGI/1vae TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RHPN2_MOUSE RHPN2_MOUSE] Binds specifically to GTP-Rho. May function in a Rho pathway to limit stress fiber formation and/or increase the turnover of F-actin structures in the absence of high levels of RhoA activity (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vae_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vae ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
| - | + | [[Category: Inoue M]] | |
| - | [[Category: Inoue | + | [[Category: Kigawa T]] |
| - | [[Category: Kigawa | + | [[Category: Koshiba S]] |
| - | [[Category: Koshiba | + | [[Category: Tochio N]] |
| - | + | [[Category: Yokoyama S]] | |
| - | [[Category: Tochio | + | [[Category: Yoneyama M]] |
| - | [[Category: Yokoyama | + | |
| - | [[Category: Yoneyama | + | |
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Current revision
Solution structure of the PDZ domain of mouse Rhophilin-2
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Categories: Large Structures | Mus musculus | Inoue M | Kigawa T | Koshiba S | Tochio N | Yokoyama S | Yoneyama M
