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1vau

From Proteopedia

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(New page: 200px<br /><applet load="1vau" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vau, resolution 1.5&Aring;" /> '''Xenon derivative of h...)
Current revision (00:00, 28 December 2023) (edit) (undo)
 
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[[Image:1vau.gif|left|200px]]<br /><applet load="1vau" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1vau, resolution 1.5&Aring;" />
 
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'''Xenon derivative of hen egg-white lysozyme'''<br />
 
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==About this Structure==
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==Xenon derivative of hen egg-white lysozyme==
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1VAU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] with CL, NA and XE as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1VAU OCA].
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<StructureSection load='1vau' size='340' side='right'caption='[[1vau]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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[[Category: Gallus gallus]]
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== Structural highlights ==
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[[Category: Lysozyme]]
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<table><tr><td colspan='2'>[[1vau]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VAU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VAU FirstGlance]. <br>
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[[Category: Single protein]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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[[Category: Kamiya, N.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
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[[Category: Kawamoto, M.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vau FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vau OCA], [https://pdbe.org/1vau PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vau RCSB], [https://www.ebi.ac.uk/pdbsum/1vau PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vau ProSAT], [https://www.topsan.org/Proteins/RSGI/1vau TOPSAN]</span></td></tr>
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[[Category: Miki, K.]]
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</table>
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[[Category: Miyatake, H.]]
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== Function ==
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[[Category: Park, S.Y.]]
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[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
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[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
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== Evolutionary Conservation ==
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[[Category: Takeda, K.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: CL]]
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Check<jmol>
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[[Category: NA]]
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<jmolCheckbox>
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[[Category: XE]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vau_consurf.spt"</scriptWhenChecked>
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[[Category: riken structural genomics/proteomics initiative]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: rsgi]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: structural genomics]]
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</jmolCheckbox>
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[[Category: xenon derivative]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vau ConSurf].
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<div style="clear:both"></div>
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 04:33:32 2007''
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==See Also==
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*[[Lysozyme 3D structures|Lysozyme 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Gallus gallus]]
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[[Category: Large Structures]]
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[[Category: Kamiya N]]
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[[Category: Kawamoto M]]
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[[Category: Miki K]]
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[[Category: Miyatake H]]
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[[Category: Park SY]]
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[[Category: Takeda K]]

Current revision

Xenon derivative of hen egg-white lysozyme

PDB ID 1vau

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