1vav
From Proteopedia
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==Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution== | ==Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution== | ||
- | <StructureSection load='1vav' size='340' side='right' caption='[[1vav]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='1vav' size='340' side='right'caption='[[1vav]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1vav]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1vav]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VAV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VAV FirstGlance]. <br> |
- | </td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <table> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vav OCA], [https://pdbe.org/1vav PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vav RCSB], [https://www.ebi.ac.uk/pdbsum/1vav PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vav ProSAT]</span></td></tr> |
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9I4H0_PSEAE Q9I4H0_PSEAE] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vav_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/1vav_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vav ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 1vav" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Pseudomonas aeruginosa]] | + | [[Category: Large Structures]] |
- | [[Category: Hashimoto | + | [[Category: Pseudomonas aeruginosa PAO1]] |
- | [[Category: Mikami | + | [[Category: Hashimoto W]] |
- | [[Category: Miyake | + | [[Category: Mikami B]] |
- | [[Category: Moriwaki | + | [[Category: Miyake O]] |
- | [[Category: Murata | + | [[Category: Moriwaki S]] |
- | [[Category: Yamasaki | + | [[Category: Murata K]] |
- | + | [[Category: Yamasaki M]] | |
- | + | ||
- | + |
Current revision
Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution
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