1vbl
From Proteopedia
(Difference between revisions)
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1vbl.gif|left|200px]]<br /><applet load="1vbl" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vbl, resolution 1.91Å" /> | ||
| - | '''Structure of the thermostable pectate lyase PL 47'''<br /> | ||
| - | == | + | ==Structure of the thermostable pectate lyase PL 47== |
| - | + | <StructureSection load='1vbl' size='340' side='right'caption='[[1vbl]], [[Resolution|resolution]] 1.91Å' scene=''> | |
| - | [[Category: Bacillus sp. | + | == Structural highlights == |
| - | [[Category: | + | <table><tr><td colspan='2'>[[1vbl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._TS-47 Bacillus sp. TS-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VBL FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91Å</td></tr> | |
| - | [[Category: Kitatani | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
| - | [[Category: Nakaniwa | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vbl OCA], [https://pdbe.org/1vbl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vbl RCSB], [https://www.ebi.ac.uk/pdbsum/1vbl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vbl ProSAT]</span></td></tr> |
| - | [[Category: Nishimura | + | </table> |
| - | [[Category: Sakai | + | == Function == |
| - | [[Category: Tada | + | [https://www.uniprot.org/uniprot/Q9AJM4_9BACI Q9AJM4_9BACI] |
| - | [[Category: Takao | + | == Evolutionary Conservation == |
| - | [[Category: Yamaguchi | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vbl_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vbl ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Bacillus sp. TS-47]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Kitatani T]] | ||
| + | [[Category: Nakaniwa T]] | ||
| + | [[Category: Nishimura K]] | ||
| + | [[Category: Sakai T]] | ||
| + | [[Category: Tada T]] | ||
| + | [[Category: Takao M]] | ||
| + | [[Category: Yamaguchi A]] | ||
Current revision
Structure of the thermostable pectate lyase PL 47
| |||||||||||
