1vdy
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana== | ==NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana== | ||
| - | <StructureSection load='1vdy' size='340' side='right' caption='[[1vdy | + | <StructureSection load='1vdy' size='340' side='right'caption='[[1vdy]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1vdy]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1vdy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDY FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdy OCA], [https://pdbe.org/1vdy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdy RCSB], [https://www.ebi.ac.uk/pdbsum/1vdy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdy ProSAT], [https://www.topsan.org/Proteins/RSGI/1vdy TOPSAN]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/MTV1_ARATH MTV1_ARATH] Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth.<ref>PMID:23771894</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdy_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdy_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vdy ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Arabidopsis thaliana]] |
| - | [[Category: Aoki | + | [[Category: Large Structures]] |
| - | [[Category: Guntert | + | [[Category: Aoki M]] |
| - | [[Category: Hirota | + | [[Category: Guntert P]] |
| - | [[Category: Inoue | + | [[Category: Hirota H]] |
| - | [[Category: Kigawa | + | [[Category: Inoue M]] |
| - | [[Category: Koshiba | + | [[Category: Kigawa T]] |
| - | [[Category: Lopez-Mendez | + | [[Category: Koshiba S]] |
| - | [[Category: Matsuda | + | [[Category: Lopez-Mendez B]] |
| - | [[Category: Osanai | + | [[Category: Matsuda T]] |
| - | [[Category: Pantoja-Uceda | + | [[Category: Osanai T]] |
| - | + | [[Category: Pantoja-Uceda D]] | |
| - | [[Category: Seki | + | [[Category: Seki E]] |
| - | [[Category: Seki | + | [[Category: Seki M]] |
| - | [[Category: Shinozaki | + | [[Category: Shinozaki K]] |
| - | [[Category: Shirouzu | + | [[Category: Shirouzu M]] |
| - | [[Category: Tanaka | + | [[Category: Tanaka A]] |
| - | [[Category: Terada | + | [[Category: Terada T]] |
| - | [[Category: Tomizawa | + | [[Category: Tomizawa T]] |
| - | [[Category: Yabuki | + | [[Category: Yabuki T]] |
| - | [[Category: Yokoyama | + | [[Category: Yokoyama S]] |
| - | [[Category: Yoshida | + | [[Category: Yoshida M]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana
| |||||||||||
Categories: Arabidopsis thaliana | Large Structures | Aoki M | Guntert P | Hirota H | Inoue M | Kigawa T | Koshiba S | Lopez-Mendez B | Matsuda T | Osanai T | Pantoja-Uceda D | Seki E | Seki M | Shinozaki K | Shirouzu M | Tanaka A | Terada T | Tomizawa T | Yabuki T | Yokoyama S | Yoshida M
