This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1veh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:02, 28 December 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1veh.jpg|left|200px]]
 
-
<!--
+
==Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA==
-
The line below this paragraph, containing "STRUCTURE_1veh", creates the "Structure Box" on the page.
+
<StructureSection load='1veh' size='340' side='right'caption='[[1veh]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1veh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1veh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1veh OCA], [https://pdbe.org/1veh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1veh RCSB], [https://www.ebi.ac.uk/pdbsum/1veh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1veh ProSAT], [https://www.topsan.org/Proteins/RSGI/1veh TOPSAN]</span></td></tr>
-
{{STRUCTURE_1veh| PDB=1veh | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA'''
+
[https://www.uniprot.org/uniprot/NFU1_MOUSE NFU1_MOUSE] Iron-sulfur cluster scaffold protein which can assemble [4Fe-2S] clusters and deliver them to target proteins.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1VEH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEH OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1veh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1veh ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Single protein]]
+
[[Category: Hirota H]]
-
[[Category: Hirota, H.]]
+
[[Category: Ohashi W]]
-
[[Category: Ohashi, W.]]
+
[[Category: Yamazaki T]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yamazaki, T.]]
+
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Mouse cdna]]
+
-
[[Category: Nifu-like]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 12:26:47 2008''
+

Current revision

Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA

PDB ID 1veh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools