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1vek

From Proteopedia

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Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA

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Retrieved from "http://52.214.119.220/wiki/index.php/1vek"

@@ Line 1: / Line 1: @@
 ==Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA==
-<StructureSection load='1vek' size='340' side='right' caption='[[1vek]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='1vek' size='340' side='right'caption='[[1vek]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1vek]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VEK FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1vek]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEK FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vek OCA], [http://pdbe.org/1vek PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vek RCSB], [http://www.ebi.ac.uk/pdbsum/1vek PDBsum], [http://www.topsan.org/Proteins/RSGI/1vek TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vek OCA], [https://pdbe.org/1vek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vek RCSB], [https://www.ebi.ac.uk/pdbsum/1vek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vek ProSAT], [https://www.topsan.org/Proteins/RSGI/1vek TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/UBP14_ARATH UBP14_ARATH]] Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development.<ref>PMID:11576424</ref> <ref>PMID:11788751</ref>
+[https://www.uniprot.org/uniprot/UBP14_ARATH UBP14_ARATH] Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development.<ref>PMID:11576424</ref> <ref>PMID:11788751</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
   <jmolCheckbox>
-    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vek_consurf.spt"</scriptWhenChecked>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vek_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 22: / Line 23: @@
 __TOC__
 </StructureSection>
-[[Category: Arath]]
+[[Category: Arabidopsis thaliana]]
-[[Category: Abe, T]]
+[[Category: Large Structures]]
-[[Category: Higuchi, Y]]
+[[Category: Abe T]]
-[[Category: Hirota, H]]
+[[Category: Higuchi Y]]
-[[Category: Kigawa, T]]
+[[Category: Hirota H]]
-[[Category: Koshiba, S]]
+[[Category: Kigawa T]]
-[[Category: Structural genomic]]
+[[Category: Koshiba S]]
-[[Category: Saito, K]]
+[[Category: Saito K]]
-[[Category: Yokoyama, S]]
+[[Category: Yokoyama S]]
-[[Category: Rsgi]]
-[[Category: Three helix bundle]]
-[[Category: Uba domain]]
-[[Category: Ubiquitin associated domain]]
-[[Category: Ubiquitin specific protease 14]]
-[[Category: Unknown function]]

1vek

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Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA

Structural highlights

Function

Evolutionary Conservation

References

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