This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ntx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:10, 28 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ntx' size='340' side='right'caption='[[2ntx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2ntx' size='340' side='right'caption='[[2ntx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ntx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ntx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTX FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2nty|2nty]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At3g24620 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntx OCA], [https://pdbe.org/2ntx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntx RCSB], [https://www.ebi.ac.uk/pdbsum/2ntx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntx OCA], [https://pdbe.org/2ntx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntx RCSB], [https://www.ebi.ac.uk/pdbsum/2ntx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ROGF8_ARATH ROGF8_ARATH]] Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. Active as homodimer.<ref>PMID:17218277</ref>
+
[https://www.uniprot.org/uniprot/ROGF8_ARATH ROGF8_ARATH] Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. Active as homodimer.<ref>PMID:17218277</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arath]]
+
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Berken, A]]
+
[[Category: Berken A]]
-
[[Category: Fricke, I]]
+
[[Category: Fricke I]]
-
[[Category: Scrima, A]]
+
[[Category: Scrima A]]
-
[[Category: Thomas, C]]
+
[[Category: Thomas C]]
-
[[Category: Wittinghofer, A]]
+
[[Category: Wittinghofer A]]
-
[[Category: Dimer]]
+
-
[[Category: Guanine nucleotide exchange factor]]
+
-
[[Category: Signaling protein]]
+

Current revision

Prone8

PDB ID 2ntx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ntx"
Personal tools