This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2nvv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:11, 28 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of the Putative Acetyl-CoA hydrolase/transferase PG1013 from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR16.==
==Crystal Structure of the Putative Acetyl-CoA hydrolase/transferase PG1013 from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR16.==
-
<StructureSection load='2nvv' size='340' side='right' caption='[[2nvv]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='2nvv' size='340' side='right'caption='[[2nvv]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2nvv]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Porgi Porgi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NVV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NVV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2nvv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NVV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NVV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PG1013 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242619 PORGI])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nvv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nvv OCA], [https://pdbe.org/2nvv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nvv RCSB], [https://www.ebi.ac.uk/pdbsum/2nvv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nvv ProSAT], [https://www.topsan.org/Proteins/NESGC/2nvv TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nvv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nvv OCA], [http://pdbe.org/2nvv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2nvv RCSB], [http://www.ebi.ac.uk/pdbsum/2nvv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2nvv ProSAT], [http://www.topsan.org/Proteins/NESGC/2nvv TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7MVN7_PORGI Q7MVN7_PORGI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Porgi]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Porphyromonas gingivalis W83]]
-
[[Category: Baran, M C]]
+
[[Category: Acton TB]]
-
[[Category: Cunningham, K]]
+
[[Category: Baran MC]]
-
[[Category: Fang, Y]]
+
[[Category: Cunningham K]]
-
[[Category: Forouhar, F]]
+
[[Category: Fang Y]]
-
[[Category: Ho, C K]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt, J F]]
+
[[Category: Ho CK]]
-
[[Category: Liu, J]]
+
[[Category: Hunt JF]]
-
[[Category: Ma, L C]]
+
[[Category: Liu J]]
-
[[Category: Montelione, G T]]
+
[[Category: Ma L-C]]
-
[[Category: Structural genomic]]
+
[[Category: Montelione GT]]
-
[[Category: Neely, H]]
+
[[Category: Neely H]]
-
[[Category: Rost, B]]
+
[[Category: Rost B]]
-
[[Category: Seetharaman, J]]
+
[[Category: Seetharaman J]]
-
[[Category: Tong, L]]
+
[[Category: Tong L]]
-
[[Category: Xiao, R]]
+
[[Category: Xiao R]]
-
[[Category: Yong, W]]
+
[[Category: Yong W]]
-
[[Category: Alpha beta protein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal Structure of the Putative Acetyl-CoA hydrolase/transferase PG1013 from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR16.

PDB ID 2nvv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2nvv"
Personal tools