This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2nwi
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2nwi.gif|left|200px]] | ||
| - | + | ==Crystal structure of protein AF1396 from Archaeoglobus fulgidus, Pfam DUF98== | |
| - | + | <StructureSection load='2nwi' size='340' side='right'caption='[[2nwi]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2nwi]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NWI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NWI FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nwi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nwi OCA], [https://pdbe.org/2nwi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nwi RCSB], [https://www.ebi.ac.uk/pdbsum/2nwi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nwi ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2nwi TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | | | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/O28875_ARCFU O28875_ARCFU] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/2nwi_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nwi ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Archaeoglobus fulgidus]] | [[Category: Archaeoglobus fulgidus]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Adams | + | [[Category: Adams J]] |
| - | [[Category: Almo | + | [[Category: Almo SC]] |
| - | [[Category: Bain | + | [[Category: Bain KT]] |
| - | [[Category: Bonanno | + | [[Category: Bonanno JB]] |
| - | [[Category: Burley | + | [[Category: Burley SK]] |
| - | [[Category: Dickey | + | [[Category: Dickey M]] |
| - | + | [[Category: Sauder JM]] | |
| - | [[Category: Sauder | + | [[Category: Smith D]] |
| - | [[Category: Smith | + | [[Category: Sridhar V]] |
| - | [[Category: Sridhar | + | [[Category: Wasserman S]] |
| - | [[Category: Wasserman | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of protein AF1396 from Archaeoglobus fulgidus, Pfam DUF98
| |||||||||||
Categories: Archaeoglobus fulgidus | Large Structures | Adams J | Almo SC | Bain KT | Bonanno JB | Burley SK | Dickey M | Sauder JM | Smith D | Sridhar V | Wasserman S

