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2nyv
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2nyv" size="450" color="white" frame="true" align="right" spinBox="true" caption="2nyv, resolution 2.103Å" /> '''X-ray crystal struc...) |
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| - | [[Image:2nyv.gif|left|200px]]<br /><applet load="2nyv" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2nyv, resolution 2.103Å" /> | ||
| - | '''X-ray crystal structure of a phosphoglycolate phosphatase from Aquifex aeolicus'''<br /> | ||
| - | == | + | ==X-ray crystal structure of a phosphoglycolate phosphatase from Aquifex aeolicus== |
| - | + | <StructureSection load='2nyv' size='340' side='right'caption='[[2nyv]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2nyv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NYV FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.103Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nyv OCA], [https://pdbe.org/2nyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nyv RCSB], [https://www.ebi.ac.uk/pdbsum/2nyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nyv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2nyv TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/GPH_AQUAE GPH_AQUAE] Specifically catalyzes the dephosphorylation of 2-phosphoglycolate (By similarity).[HAMAP-Rule:MF_00495] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nyv_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nyv ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Aquifex aeolicus]] | [[Category: Aquifex aeolicus]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Burley SK]] | |
| - | [[Category: Burley | + | [[Category: Ciatto C]] |
| - | [[Category: Ciatto | + | [[Category: Gorman J]] |
| - | [[Category: Gorman | + | [[Category: Min T]] |
| - | [[Category: Min | + | [[Category: Shapiro L]] |
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| - | [[Category: Shapiro | + | |
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Current revision
X-ray crystal structure of a phosphoglycolate phosphatase from Aquifex aeolicus
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