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2o34
From Proteopedia
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==Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375== | ==Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375== | ||
| - | <StructureSection load='2o34' size='340' side='right' caption='[[2o34]], [[Resolution|resolution]] 1.95Å' scene=''> | + | <StructureSection load='2o34' size='340' side='right'caption='[[2o34]], [[Resolution|resolution]] 1.95Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2o34]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2o34]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O34 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O34 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o34 OCA], [https://pdbe.org/2o34 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o34 RCSB], [https://www.ebi.ac.uk/pdbsum/2o34 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o34 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o34 TOPSAN]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q72D34_DESVH Q72D34_DESVH] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o34_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o34_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o34 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Desulfovibrio vulgaris]] |
| - | [[Category: Adams | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Adams JM]] |
| - | [[Category: Atwell | + | [[Category: Almo SC]] |
| - | [[Category: Bain | + | [[Category: Atwell S]] |
| - | [[Category: Boice | + | [[Category: Bain KT]] |
| - | [[Category: Burley | + | [[Category: Boice A]] |
| - | [[Category: Dickey | + | [[Category: Burley SK]] |
| - | [[Category: Emtage | + | [[Category: Dickey M]] |
| - | [[Category: Gheyi | + | [[Category: Emtage S]] |
| - | [[Category: Groshong | + | [[Category: Gheyi T]] |
| - | [[Category: Malashkevich | + | [[Category: Groshong C]] |
| - | + | [[Category: Malashkevich VN]] | |
| - | [[Category: Ozyurt | + | [[Category: Ozyurt S]] |
| - | [[Category: Powell | + | [[Category: Powell A]] |
| - | [[Category: Reyes | + | [[Category: Reyes C]] |
| - | [[Category: Rooney | + | [[Category: Rooney I]] |
| - | [[Category: Rutter | + | [[Category: Rutter ME]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Schwinn | + | [[Category: Schwinn KD]] |
| - | [[Category: Thompson | + | [[Category: Thompson DA]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman SR]] |
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Current revision
Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375
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Categories: Desulfovibrio vulgaris | Large Structures | Adams JM | Almo SC | Atwell S | Bain KT | Boice A | Burley SK | Dickey M | Emtage S | Gheyi T | Groshong C | Malashkevich VN | Ozyurt S | Powell A | Reyes C | Rooney I | Rutter ME | Sauder JM | Schwinn KD | Thompson DA | Toro R | Wasserman SR
