This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2o3g
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2o3g" size="350" color="white" frame="true" align="right" spinBox="true" caption="2o3g, resolution 2.55Å" /> '''Structural Genomics,...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2o3g.gif|left|200px]]<br /><applet load="2o3g" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2o3g, resolution 2.55Å" /> | ||
| - | '''Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58'''<br /> | ||
| - | == | + | ==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58== |
| - | + | <StructureSection load='2o3g' size='340' side='right'caption='[[2o3g]], [[Resolution|resolution]] 2.55Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3G FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55Å</td></tr> |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [https://pdbe.org/2o3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [https://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [https://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr> |
| - | [[ | + | </table> |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/Q9JYP7_NEIMB Q9JYP7_NEIMB] |
| - | [ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3g_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o3g ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Neisseria meningitidis MC58]] | ||
| + | [[Category: Gu M]] | ||
| + | [[Category: Joachimiak A]] | ||
| + | [[Category: Tan K]] | ||
| + | [[Category: Volkart L]] | ||
Current revision
Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58
| |||||||||||
