This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2o57

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:14, 28 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2o57.png|left|200px]]
 
-
<!--
+
==Crystal Structure of a putative sarcosine dimethylglycine methyltransferase from Galdieria sulphuraria==
-
The line below this paragraph, containing "STRUCTURE_2o57", creates the "Structure Box" on the page.
+
<StructureSection load='2o57' size='340' side='right'caption='[[2o57]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2o57]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O57 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.946&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2o57| PDB=2o57 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o57 OCA], [https://pdbe.org/2o57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o57 RCSB], [https://www.ebi.ac.uk/pdbsum/2o57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o57 ProSAT], [https://www.topsan.org/Proteins/CESG/2o57 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of a putative sarcosine dimethylglycine methyltransferase from Galdieria sulphuraria===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2O57 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O57 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o5/2o57_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o57 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Galdieria sulphuraria]]
[[Category: Galdieria sulphuraria]]
-
[[Category: Bingman, C A.]]
+
[[Category: Large Structures]]
-
[[Category: Bitto, E.]]
+
[[Category: Bingman CA]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: Bitto E]]
-
[[Category: Jr., G N.Phillips.]]
+
[[Category: Mccoy JG]]
-
[[Category: Mccoy, J G.]]
+
[[Category: Phillips Jr GN]]
-
[[Category: Wesenberg, G E.]]
+
[[Category: Wesenberg GE]]
-
[[Category: Center for eukaryotic structural genomic]]
+
-
[[Category: Cesg]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:51:08 2009''
+

Current revision

Crystal Structure of a putative sarcosine dimethylglycine methyltransferase from Galdieria sulphuraria

PDB ID 2o57

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o57"
Personal tools