This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2o5h
From Proteopedia
(Difference between revisions)
| (11 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2o5h.gif|left|200px]] | ||
| - | + | ==Uncharacterized Protein Conserved in Bacteria, COG3792 from Neisseria meningitidis== | |
| - | + | <StructureSection load='2o5h' size='340' side='right'caption='[[2o5h]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2o5h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O5H FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o5h OCA], [https://pdbe.org/2o5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o5h RCSB], [https://www.ebi.ac.uk/pdbsum/2o5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o5h ProSAT], [https://www.topsan.org/Proteins/MCSG/2o5h TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q9K0R7_NEIMB Q9K0R7_NEIMB] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o5/2o5h_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: Bargassa | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o5h ConSurf]. |
| - | [[Category: Gu | + | <div style="clear:both"></div> |
| - | [[Category: Joachimiak | + | __TOC__ |
| - | [[Category: Kim | + | </StructureSection> |
| - | [[Category: Li | + | [[Category: Large Structures]] |
| - | + | [[Category: Neisseria meningitidis MC58]] | |
| - | + | [[Category: Bargassa M]] | |
| - | + | [[Category: Gu M]] | |
| - | + | [[Category: Joachimiak A]] | |
| - | + | [[Category: Kim Y]] | |
| - | + | [[Category: Li H]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Uncharacterized Protein Conserved in Bacteria, COG3792 from Neisseria meningitidis
| |||||||||||

