This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2od5
From Proteopedia
(Difference between revisions)
| (16 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2od5.gif|left|200px]]<br /><applet load="2od5" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2od5, resolution 1.790Å" /> | ||
| - | '''Crystal structure of a putative nucleic acid binding protein (JCVI_PEP_1096688149193) from an environmental metagenome (unidentified marine microbe), Sorcerer II Global Ocean Sampling experiment at 1.79 A resolution'''<br /> | ||
| - | == | + | ==CRYSTAL STRUCTURE OF A PUTATIVE NUCLEIC ACID BINDING PROTEIN (JCVI_PEP_1096688149193) FROM UNCULTURED MARINE ORGANISM AT 1.79 A RESOLUTION== |
| - | + | <StructureSection load='2od5' size='340' side='right'caption='[[2od5]], [[Resolution|resolution]] 1.79Å' scene=''> | |
| - | [[Category: | + | == Structural highlights == |
| + | <table><tr><td colspan='2'>[[2od5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Uncultured_marine_organism Uncultured marine organism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OD5 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2od5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2od5 OCA], [https://pdbe.org/2od5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2od5 RCSB], [https://www.ebi.ac.uk/pdbsum/2od5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2od5 ProSAT], [https://www.topsan.org/Proteins/JCSG/2od5 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Uncultured marine organism]] | [[Category: Uncultured marine organism]] | ||
| - | [[Category: JCSG, Joint Center for Structural Genomics.]] | ||
| - | [[Category: 1PE]] | ||
| - | [[Category: CL]] | ||
| - | [[Category: EDO]] | ||
| - | [[Category: IMD]] | ||
| - | [[Category: hypothetical protein]] | ||
| - | [[Category: jcsg]] | ||
| - | [[Category: jcvi_pep_1096688149193]] | ||
| - | [[Category: joint center for structural genomics]] | ||
| - | [[Category: metagenomics]] | ||
| - | [[Category: protein structure initiative]] | ||
| - | [[Category: psi-2]] | ||
| - | [[Category: structural genomics]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:17:07 2008'' | ||
Current revision
CRYSTAL STRUCTURE OF A PUTATIVE NUCLEIC ACID BINDING PROTEIN (JCVI_PEP_1096688149193) FROM UNCULTURED MARINE ORGANISM AT 1.79 A RESOLUTION
| |||||||||||
