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2odj

From Proteopedia

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Current revision (00:17, 28 December 2023) (edit) (undo)
 
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<StructureSection load='2odj' size='340' side='right'caption='[[2odj]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='2odj' size='340' side='right'caption='[[2odj]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2odj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ODJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ODJ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2odj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ODJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ODJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">oprD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odj OCA], [https://pdbe.org/2odj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odj RCSB], [https://www.ebi.ac.uk/pdbsum/2odj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2odj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2odj OCA], [https://pdbe.org/2odj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2odj RCSB], [https://www.ebi.ac.uk/pdbsum/2odj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2odj ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/PORD_PSEAE PORD_PSEAE]] Porin with a specificity for basic amino acids. Also possesses serine protease activity.<ref>PMID:2118530</ref> <ref>PMID:8843159</ref>
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[https://www.uniprot.org/uniprot/PORD_PSEAE PORD_PSEAE] Porin with a specificity for basic amino acids. Also possesses serine protease activity.<ref>PMID:2118530</ref> <ref>PMID:8843159</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pseae]]
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[[Category: Pseudomonas aeruginosa PAO1]]
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[[Category: Berg, B van den]]
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[[Category: Biswas S]]
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[[Category: Biswas, S]]
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[[Category: Van den Berg B]]
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[[Category: Amino acid transport]]
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[[Category: Beta-barrel]]
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[[Category: Membrane protein]]
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[[Category: Outer membrane protein]]
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Current revision

Crystal structure of the outer membrane protein OprD from Pseudomonas aeruginosa

PDB ID 2odj

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