This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2olk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2olk" [edit=sysop:move=sysop])
Current revision (00:20, 28 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2olk.png|left|200px]]
 
-
<!--
+
==ABC Protein ArtP in complex with ADP-beta-S==
-
The line below this paragraph, containing "STRUCTURE_2olk", creates the "Structure Box" on the page.
+
<StructureSection load='2olk' size='340' side='right'caption='[[2olk]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2olk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OLK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AT4:5-O-[(R)-HYDROXY(THIOPHOSPHONOOXY)PHOSPHORYL]ADENOSINE'>AT4</scene></td></tr>
-
{{STRUCTURE_2olk| PDB=2olk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2olk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2olk OCA], [https://pdbe.org/2olk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2olk RCSB], [https://www.ebi.ac.uk/pdbsum/2olk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2olk ProSAT]</span></td></tr>
-
 
+
</table>
-
===ABC Protein ArtP in complex with ADP-beta-S===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/D0VWX4_GEOSE D0VWX4_GEOSE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2olk]] is a 4 chain structure of [[ABC transporter]] with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OLK OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/2olk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2olk ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[ABC transporter]]
+
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Polar-amino-acid-transporting ATPase]]
+
[[Category: Large Structures]]
-
[[Category: Eckey, V.]]
+
[[Category: Eckey V]]
-
[[Category: Saenger, W.]]
+
[[Category: Saenger W]]
-
[[Category: Scheffel, F.]]
+
[[Category: Scheffel F]]
-
[[Category: Schneider, E.]]
+
[[Category: Schneider E]]
-
[[Category: Thaben, P F.]]
+
[[Category: Thaben PF]]
-
[[Category: Vahedi-Faridi, A.]]
+
[[Category: Vahedi-Faridi A]]
-
[[Category: Abc domain]]
+
-
[[Category: Atpase]]
+
-
[[Category: Hydrolase]]
+

Current revision

ABC Protein ArtP in complex with ADP-beta-S

PDB ID 2olk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2olk"
Personal tools