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2tep
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2tep" size="450" color="white" frame="true" align="right" spinBox="true" caption="2tep, resolution 2.50Å" /> '''PEANUT LECTIN COMPLE...) |
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| - | [[Image:2tep.jpg|left|200px]]<br /><applet load="2tep" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2tep, resolution 2.50Å" /> | ||
| - | '''PEANUT LECTIN COMPLEXED WITH T-ANTIGENIC DISACCHARIDE'''<br /> | ||
| - | == | + | ==PEANUT LECTIN COMPLEXED WITH T-ANTIGENIC DISACCHARIDE== |
| - | + | <StructureSection load='2tep' size='340' side='right'caption='[[2tep]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2tep]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1tep 1tep]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2TEP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2TEP FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2tep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2tep OCA], [https://pdbe.org/2tep PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2tep RCSB], [https://www.ebi.ac.uk/pdbsum/2tep PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2tep ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin. | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/te/2tep_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2tep ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Agglutinin 3D structures|Agglutinin 3D structures]] | ||
| + | *[[Galactose-binding lectin|Galactose-binding lectin]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Arachis hypogaea]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ravindran M]] | ||
| + | [[Category: Ravishankar R]] | ||
| + | [[Category: Suguna K]] | ||
| + | [[Category: Surolia A]] | ||
| + | [[Category: Vijayan M]] | ||
Current revision
PEANUT LECTIN COMPLEXED WITH T-ANTIGENIC DISACCHARIDE
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