This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ewn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:25, 28 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ewn.png|left|200px]]
 
-
<!--
+
==Crystal structure of a THiJ/PfpI family protein from Pseudomonas syringae==
-
The line below this paragraph, containing "STRUCTURE_3ewn", creates the "Structure Box" on the page.
+
<StructureSection load='3ewn' size='340' side='right'caption='[[3ewn]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ewn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EWN FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3ewn| PDB=3ewn | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ewn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewn OCA], [https://pdbe.org/3ewn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ewn RCSB], [https://www.ebi.ac.uk/pdbsum/3ewn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewn ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3ewn TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of a THiJ/PfpI family protein from Pseudomonas syringae===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q881P0_PSESM Q881P0_PSESM]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3EWN is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWN OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/3ewn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ewn ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas syringae pv. tomato]]
[[Category: Pseudomonas syringae pv. tomato]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Sugadev R]]
-
[[Category: Sugadev, R.]]
+
[[Category: Swaminathan S]]
-
[[Category: Swaminathan, S.]]
+
-
[[Category: Monomer]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Pseudomonas syringae]]
+
-
[[Category: Psi-ii]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Thij/pfpi family protein]]
+
-
[[Category: Unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:56:54 2009''
+

Current revision

Crystal structure of a THiJ/PfpI family protein from Pseudomonas syringae

PDB ID 3ewn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools