This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3eyp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:26, 28 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of putative alpha-L-fucosidase from Bacteroides thetaiotaomicron==
==Crystal structure of putative alpha-L-fucosidase from Bacteroides thetaiotaomicron==
-
<StructureSection load='3eyp' size='340' side='right' caption='[[3eyp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='3eyp' size='340' side='right'caption='[[3eyp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3eyp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_thetaiotaomicron"_distaso_1912 "bacillus thetaiotaomicron" distaso 1912]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EYP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EYP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3eyp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EYP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EYP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT_2192 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3eyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eyp OCA], [http://pdbe.org/3eyp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3eyp RCSB], [http://www.ebi.ac.uk/pdbsum/3eyp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3eyp ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3eyp TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eyp OCA], [https://pdbe.org/3eyp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eyp RCSB], [https://www.ebi.ac.uk/pdbsum/3eyp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eyp ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3eyp TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8A5P6_BACTN Q8A5P6_BACTN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus thetaiotaomicron distaso 1912]]
+
[[Category: Bacteroides thetaiotaomicron]]
-
[[Category: Almo, S C]]
+
[[Category: Large Structures]]
-
[[Category: Bain, K T]]
+
[[Category: Almo SC]]
-
[[Category: Bonanno, J B]]
+
[[Category: Bain KT]]
-
[[Category: Burley, S K]]
+
[[Category: Bonanno JB]]
-
[[Category: Freeman, J]]
+
[[Category: Burley SK]]
-
[[Category: Hu, S]]
+
[[Category: Freeman J]]
-
[[Category: Structural genomic]]
+
[[Category: Hu S]]
-
[[Category: Romero, R]]
+
[[Category: Romero R]]
-
[[Category: Sauder, J M]]
+
[[Category: Sauder JM]]
-
[[Category: Wasserman, S]]
+
[[Category: Wasserman S]]
-
[[Category: Hydrolase]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of putative alpha-L-fucosidase from Bacteroides thetaiotaomicron

PDB ID 3eyp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools