This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3nrv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3nrv" [edit=sysop:move=sysop])
Current revision (00:33, 28 December 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3nrv| PDB=3nrv | SCENE= }}
 
-
===Crystal structure of MarR/EmrR family transcriptional regulator from Acinetobacter sp. ADP1===
 
-
==About this Structure==
+
==Crystal structure of MarR/EmrR family transcriptional regulator from Acinetobacter sp. ADP1==
-
[[3nrv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_sp._adp1 Acinetobacter sp. adp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRV OCA].
+
<StructureSection load='3nrv' size='340' side='right'caption='[[3nrv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Acinetobacter sp. adp1]]
+
== Structural highlights ==
-
[[Category: Joachimiak, A.]]
+
<table><tr><td colspan='2'>[[3nrv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NRV FirstGlance]. <br>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
[[Category: Wu, R.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Zhang, R.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nrv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nrv OCA], [https://pdbe.org/3nrv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nrv RCSB], [https://www.ebi.ac.uk/pdbsum/3nrv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nrv ProSAT]</span></td></tr>
-
[[Category: Protein structure initiative]]
+
</table>
-
[[Category: Psi-2]]
+
== Function ==
-
[[Category: Structural genomic]]
+
[https://www.uniprot.org/uniprot/Q6FBB7_ACIAD Q6FBB7_ACIAD]
-
[[Category: Transcription regulator]]
+
== Evolutionary Conservation ==
-
[[Category: Transcriptional regulator]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/3nrv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nrv ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Acinetobacter baylyi ADP1]]
 +
[[Category: Large Structures]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Wu R]]
 +
[[Category: Zhang R]]

Current revision

Crystal structure of MarR/EmrR family transcriptional regulator from Acinetobacter sp. ADP1

PDB ID 3nrv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools