This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4pb4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:42, 28 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with 2-amino maleic acid==
==D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with 2-amino maleic acid==
-
<StructureSection load='4pb4' size='340' side='right' caption='[[4pb4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='4pb4' size='340' side='right'caption='[[4pb4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4pb4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PB4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PB4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4pb4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Delftia_sp._HT23 Delftia sp. HT23]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PB4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PB4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2KZ:2-AMINO+MALEIC+ACID'>2KZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wqc|3wqc]], [[3wqd|3wqd]], [[3wqe|3wqe]], [[3wqf|3wqf]], [[3wqg|3wqg]], [[4pb3|4pb3]], [[4pb5|4pb5]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2KZ:2-AMINO+MALEIC+ACID'>2KZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Threo-3-hydroxy-D-aspartate_ammonia-lyase Threo-3-hydroxy-D-aspartate ammonia-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.1.27 4.3.1.27] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pb4 OCA], [https://pdbe.org/4pb4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pb4 RCSB], [https://www.ebi.ac.uk/pdbsum/4pb4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pb4 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pb4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pb4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pb4 RCSB], [http://www.ebi.ac.uk/pdbsum/4pb4 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DTHAD_DELSH DTHAD_DELSH]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4pb4" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Threo-3-hydroxy-D-aspartate ammonia-lyase]]
+
[[Category: Delftia sp. HT23]]
-
[[Category: Matsumoto, Y]]
+
[[Category: Large Structures]]
-
[[Category: Wada, M]]
+
[[Category: Matsumoto Y]]
-
[[Category: Yasutake, Y]]
+
[[Category: Wada M]]
-
[[Category: Dehydratase]]
+
[[Category: Yasutake Y]]
-
[[Category: Lyase]]
+
-
[[Category: Metalloprotein]]
+
-
[[Category: Plp enzyme]]
+

Current revision

D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with 2-amino maleic acid

PDB ID 4pb4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools